| Agua Tibia | 16.0 miles | Challenging |
| Airplane Ridge/Airplane Monument | 5.8 miles | Moderate |
| Ant Benchmark | 1.7 miles | Moderate |
| Boucher Hill/Scott’s Cabin | 3.65 miles | Moderate |
| Cemetery Hill | 3.6 miles | Moderate |
| Chariot Mountain | 5.6 miles | Strenuous |
| Combs Peak | 4.3 miles | Moderate |
| Corte Madera | 6.8 miles | Moderate |
| Cush-Pi (Stonewall Peak) | 4.1 miles | Moderate |
| Cuyamaca Peak (via Burnt Pine) | 14.2 miles | Strenuous |
| Cuyamaca Peak (via Conejos Trail) | 8.6 miles | Moderate |
| Cuyamaca Peak (via Service Road) | 5.4 miles | Moderate |
| Desert View Nature Trail | 1.0 miles | Easy |
| Eagle Crag | 18.4 miles | Challenging |
| Eagle Peak | 4.8 miles | Moderate |
| Eagle Rock | 6.5 miles | Moderate |
| East Mesa High Point | 9.5 miles | Moderate |
| Garnet Mountain | 0.75 miles | Moderate |
| Garnet Peak | 2.4 miles | Moderate |
| Guatay Mountain | 5.8 miles | Moderate-Strenuous |
| Hot Springs Mountain | 10.1 miles | Strenuous |
| Hot Springs Mountain (via Nelson Camp) | 6.9 miles | Moderate |
| Inaja Nature Trail | 0.5 miles | Easy |
| Japacha Peak | 9.5 miles | Moderate |
| Kwaaymii Nature Trail | 0.5 miles | Easy |
| Long Valley Peak | 4.2 miles | Moderate |
| Los Pinos Lookout | 0.2 miles | Easy |
| Manza Benchmark | 4.0 miles | Strenuous |
| Middle Peak | 5.8 miles | Moderate |
| Monument Peak | 2.9 miles | Moderate |
| Oak Benchmark | 0.9 miles | Moderate |
| Oakzanita Peak | 5.9 miles | Moderate |
| Oriflamme Mountain | 4.4 miles | Moderate |
| Palomar High Point via Oak Grove | 13.2 miles | Strenuous |
| Pine Mountain | 4.1 miles | Moderate |
| Roost Benchmark | 7.3 miles | Strenuous |
| Santa Ysabel East – Kanaka Flat Loop | 7.0 miles | Moderate |
| Santa Ysabel East – Nature Center Loop | 3.75 miles | Moderate |
| Santa Ysabel Loop | 4.25 miles | Moderate |
| Santa Ysabel West Preserve | 5.8 miles | Moderate |
| Sheephead Mountain | 3.6 miles | Strenuous |
| Sugg Peak | 7.5 miles | Moderate |
| Sunshine Mountain | 2.6 miles | Moderate |
| Volcan Mountain | 5.2 miles | Moderate |
| Wild Horse Peak | 10.1 miles | Strenuous |
| William Heise County Park | 1-9 miles | Easy-Moderate |
| Wooded Hill | 1.5 miles | Easy |